CDS

Accession Number TCMCG006C81592
gbkey CDS
Protein Id XP_013691816.1
Location join(12868942..12869039,12869121..12869239,12869321..12870253,12870339..12870734,12870815..12870905,12870995..12872063,12872146..12872225,12872302..12872386,12872474..12872565,12872639..12872707,12872780..12872816,12872898..12872980,12873109..12873528,12873702..12873738,12873873..12873930,12874006..12874145,12874237..12874302,12874385..12874499,12874573..12874611,12874691..12874806)
Gene LOC106396066
GeneID 106396066
Organism Brassica napus

Protein

Length 1380aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013836362.1
Definition protein ROS1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description termination of RNA polymerase II transcription
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K14400        [VIEW IN KEGG]
ko:K14510        [VIEW IN KEGG]
EC 2.7.11.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03015        [VIEW IN KEGG]
ko04016        [VIEW IN KEGG]
ko04075        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
map04016        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0000993        [VIEW IN EMBL-EBI]
GO:0001098        [VIEW IN EMBL-EBI]
GO:0001099        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005849        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006353        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006369        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043175        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070063        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATAAACAAGCGAGAGAAGAAACTACATGGGTTCCTCAGACACCCATCAAGCCAATTGCTCCGATCTACCCAGATCAGATTCAGACAGAGGAAAGGAGATTCGCTGGGAACAAAGACAAGAGTGGTCTTGACCATTTGTCTTTTGGAGATTTGCTGGCTCTAGCCAACAATGCTTCATCAGTGTTTTTATCTCGTCAGAATGGGATTGATAAAGAAAGTGTCATCAAGACTCCTGAAAAGCCAAAGAGGAAGAAGCATAGGCCAAAGGTTGTTAGAGAAGCGAAACCGAAGAGAGATATTAAACCGAAAACTCCGAAGAAGCCTGCTGCTGCTGCTGTTGAGGGTGAAGAAAGCAAAACGCCTAAGAGGAAATACGCGAGGAAGAAAAAAGAAGCTGGTGAGGATCAAGAAGAATACACGCCTGTTGAAGAATCATCAGGAGCAGCAGCAGAAGATAAAGAATCTTCAGCTCATGATGGCAAGAAGGCTTGTAGAAGAGCCTTGGAGTTTGACGATGAGAGTCTCAAATCCGAAAACGGAGAAACACAGCACAGAGATGAGACAAAGCAGGATCAAGACTTGCAAGATTGTCATACGGCGGCAGTGCCCAGCACGCCTAAGAGAAAGCGCAGCAGCCAAAGTAGAAGAATGGGAAAGGAACCGAAGAATAATGAGGCACAAGCCACAAAGAGGAGACAAGGCAAAGAACCAACTAGAAGTAACATATATTTTTCAGGGGAGCTATACGAGCAGGTGTTTGCGGACAATGAAGCACAATGGTTGTTTTCCACAGACTGGCAGCAGAAAGGGATGAGATCTCGTTCCACAACTGGACAACAACTTGTTACACAAGAGAATGTTTCTGCCTATAACTCAGGCTGTAGATTCCTAACCTTTCAGGGAAGGCAGAGTTTTGAGTCTAATGCTCACTTGGATAAGATAGAAACTCCAACAAAGAAGAGAACTACAGGCCACGCTCGGTTCCGGGGTTTGTCTTCCACAAATAAAGCTTCTGAGCAGTCCCAAGTAGGATGGTATAGCAGACAGACGCAAGTGGCCTCAAGCAGAAAGAAACGAACCACTAAGTCTCAGACCAAACAGCTCACTCTTCTCCCTAATCACTGCCACTTTCCACCTTCATTTGCTGCAGGACTAGCTCCAGAAGCTATTTGGCAGCAGCGCCACTCTATTGAAGCAATCAGCGAGCTAATGCGTCTACTAGACATCAACAGAGAGTACTCAGAAACTGCTCTTGTTCCTTATGGAATGAACAGCAGTTACAGCGTAGGAAACCAGATCGTGCTCTTCGACGGTGGCGCTGGAGCTATAGTGCCTTCGACTCGCGTTAAGAAGCCGCGGCGCGAACGTGCAAAGGTTCATATAGATAATGAGACGGATAGAGTCTGGAAGCTTTTGATGGAGAGTATCGATAGCGAAGGTGTTGACGGATCAGACGAGAAGAAGGCCAAATGGTGGGAGGAAGAACGTAATGTGTTTAGAGGAAGAGCTGACTCATTCATAGCACGAATGCATCTTGTTCAAGGTGATAGACGCTTTACACCTTGGAAAGGATCAGTTGTTGATTCTGTGGTTGGAGTGTTTCTCACTCAAAACGTTTCTGATCATCTCTCAAGCTCTGCGTTTATGTCACTAGCTGCGGAGTATCCAGTACCTTTTGTACCCAGCAGTGACTTTGAAGTAGGAGAAAGCTCCATGCCTTCTATCAGGATAACCTACTTGGACTCGGACGAACCGATCTCAAACCCACCAGTTCCCAGTGAGACTTCTGCTGCTTTAAACATCACAGAGCCTGATGAGGAGAAGGAGTATGTAAACAGCAATGACACCTCAAGAAGCAGCAGTGAGATTGCCAGCTCAGGGAATGAGTCAGCTGTCAAAACCACTGATTCAAAGGCGCAGGTGGATTCAGACAGAACTGGCTCAAGCGTAGAAGTTAGCAAGACAGTTCACATTGTCCATGAGCTGTTTCCATCTGAAGATTCTGTGCTCACAAGTCAGAAGTCATTGGTTTCTGATACTCCTCTAAGCACAGAGAGAGCAGGATCAAGCTCTGAGATTAACTCAGAAGTAGAGCATTGTACTCCCTTTATGAAGCTCCTAGAGTCTCAGGGGTCTGCTCAGCTACAAGGGAAAGGAAAGGACGTTATCACAGCTGATACTGTCTCAGTTGAAGTTGGGGGTTCAAACACGTCTCCTGGTGATTGTTGTAGCTCAGAGGTTAAAGACTTCTTCAAATCATTGAAAGGGTACACAAATGATGAGCCATGTTGCTTCTTTGGGGATGTTCAGAAACCAGAGATGCCTGAAAGCTCCAGCAGCGTTCCTTCAACAAAACTGGTGATGCAAACTCCAATTCCAGATATTAACGAAAGCACAAACTGTCTTGATGTCCAAGAAGGTACAGAAAAACAGCCAGGACCTGACTCATCATCCAAAAAGTTCAGTCCTATGGATAAGGCTACTTTCAATGCGGATGGGAAGAAGATTCTAAAGGAGGTGGAAGAGGAGTTTGATTGGGACAGTTTAAGAAGAGAAGCGGAAGGCAGAGAAGGCAAAAGAGAGAAAACAGCAAGGTCATTGGACTCTGTTGACTGGGAAGCCATTAGAACTGCTGATGTTAATGAAGTCGCTGAAACAATTAAGAGCCGTGGGATGAATCATAAACTTGCTGAACGTATACAGGGCTTCCTTAACCGACTGCTAACAGACCATGGGAGTCTTGATCTTGAATGGTTGAGAGATGTTCCACCTGACAAAGCAAAAGAATATCTTCTGAGCTTCAATGGACTGGGACTAAAAAGCGTGGAGTGTGTTAGGCTGCTAACGCTGCACCATCTTGCCTTTCCAGTTGATACCAATGTTGGACGCATAGCAGTTAGACTCGGATGGGTACCCCTTCAACCGCTTCCGGAGTCCCTTCAACTACATCTTCTCGAGATGTATCCTGTGCTTGAGTCTATACAGAAGTATCTTTGGCCACGTTTATGCAAATTTGACCAAAAAACATTGTATGAACTGCATTACCAAATGATTACTTTCGGAAAGGTGTTCTGCACGAAGAGCAAACCCAACTGCAATGCTTGTCCTATGAGAGGGGAATGTAGACACTTTGCTAGTGCCTTTGCAAGTGCGAGGTTTGCATTACCTGGTCCAGAGAGAGGAATGGAGAGACCTGATATTCCTCTACAGAGCCTGCCAGAGCCATTGCGGAGGCAGCAGGGGTTAGAAGTAGTCAACCACTCAGAAGCAGCAAATAGGGTCACAAGCTGTGAGCCGATAATTGAAGTGCCAGCATCACCAGAGCCAGAGTGCGCAGAAGTTTCAATGGCTGATATAGAGGACGCTTTCTTTGAGGATCCTGAAGAGATTCCAACAATAAGGCTGAACATGGATGCATTCACAAACAACCTGAAGAAAATTTTTGAACACAGCAAGGAACTGCAAGATGGAAACATGTCTGGAGCTCTGGTTGCACTTACCGCTGAGGCTGCTTCTCTTCCAATGCCTAGGCTCAAGAACATTAGTCAGCTGAGGACTGAACACCAAGTCTATGAACTTAAAGACGACCATCCTCTTCTAGCCCAGTTTGAGAAGCGAGAAACTGATGATCCATGTTCGTACTTGCTTGCTATATGGACGCCAGGTGAGACGGTTGATTCCATTCAACCAACTAGAAGCAAATGCATTTGGCAAGAAGCAGGCAAACTGTGTAATGAGAAAACTTGTTTCTCATGCAACAACATAAGGGAGACGCAATCACAAACCGTTAGAGGGACCATCTTGGTACCTTGTAGAACAGCAATGAGAGGTAGCTTCCCACTCAACGGTACATACTTCCAAGTCAACGAGGTGTTTGCGGATCATGAGTCTAGCCTAACGCCAATTGATGTTCCAAGAGACTGGTTATGGGACCTAGCTAGAAGAACTGTCTACTTCGGCACATCTATCCCATCAATATTTAAAGGTTTATCTACTGAAACAATTCAACAATGTTTCTGGAGAGGGTATGTATGTGTGAGAGGATTTGATAGGCAGACAAGAGCACCAAGGCCTTTGATCGCGAGGTTGCACTTCCCTAAAAGCAAAATGAAGTCACCGGTTAATCCGGATGATGCATAG
Protein:  
MDKQAREETTWVPQTPIKPIAPIYPDQIQTEERRFAGNKDKSGLDHLSFGDLLALANNASSVFLSRQNGIDKESVIKTPEKPKRKKHRPKVVREAKPKRDIKPKTPKKPAAAAVEGEESKTPKRKYARKKKEAGEDQEEYTPVEESSGAAAEDKESSAHDGKKACRRALEFDDESLKSENGETQHRDETKQDQDLQDCHTAAVPSTPKRKRSSQSRRMGKEPKNNEAQATKRRQGKEPTRSNIYFSGELYEQVFADNEAQWLFSTDWQQKGMRSRSTTGQQLVTQENVSAYNSGCRFLTFQGRQSFESNAHLDKIETPTKKRTTGHARFRGLSSTNKASEQSQVGWYSRQTQVASSRKKRTTKSQTKQLTLLPNHCHFPPSFAAGLAPEAIWQQRHSIEAISELMRLLDINREYSETALVPYGMNSSYSVGNQIVLFDGGAGAIVPSTRVKKPRRERAKVHIDNETDRVWKLLMESIDSEGVDGSDEKKAKWWEEERNVFRGRADSFIARMHLVQGDRRFTPWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAAEYPVPFVPSSDFEVGESSMPSIRITYLDSDEPISNPPVPSETSAALNITEPDEEKEYVNSNDTSRSSSEIASSGNESAVKTTDSKAQVDSDRTGSSVEVSKTVHIVHELFPSEDSVLTSQKSLVSDTPLSTERAGSSSEINSEVEHCTPFMKLLESQGSAQLQGKGKDVITADTVSVEVGGSNTSPGDCCSSEVKDFFKSLKGYTNDEPCCFFGDVQKPEMPESSSSVPSTKLVMQTPIPDINESTNCLDVQEGTEKQPGPDSSSKKFSPMDKATFNADGKKILKEVEEEFDWDSLRREAEGREGKREKTARSLDSVDWEAIRTADVNEVAETIKSRGMNHKLAERIQGFLNRLLTDHGSLDLEWLRDVPPDKAKEYLLSFNGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYPVLESIQKYLWPRLCKFDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARFALPGPERGMERPDIPLQSLPEPLRRQQGLEVVNHSEAANRVTSCEPIIEVPASPEPECAEVSMADIEDAFFEDPEEIPTIRLNMDAFTNNLKKIFEHSKELQDGNMSGALVALTAEAASLPMPRLKNISQLRTEHQVYELKDDHPLLAQFEKRETDDPCSYLLAIWTPGETVDSIQPTRSKCIWQEAGKLCNEKTCFSCNNIRETQSQTVRGTILVPCRTAMRGSFPLNGTYFQVNEVFADHESSLTPIDVPRDWLWDLARRTVYFGTSIPSIFKGLSTETIQQCFWRGYVCVRGFDRQTRAPRPLIARLHFPKSKMKSPVNPDDA